i was givin the medication doxycycline for the treatment of chlamydia by my local clinic. the doctor told me to take the pills twice a day for a week and to abstain from sexual intercourse while on the medicine and another week after. on the 6th day of taking the meds, i had sex with my partner but we used a condom. my questions are when does the infection clear up and is there a possibility that he could be infected in spite of using the protection...?? was it alright for me to have sex while still taking the medicine?